Package index

All functions

add_adr() stable

Add adverse drug reaction column(s) to a dataset

add_dose() experimental

Add drug dose column(s) to a dataset, in milligram per day

add_drug() stable

Add drug column(s) to a dataset

add_ind() experimental

Add indication column(s) to a dataset

cff()

Fast formatting of numbers

check_dm() stable

Check binary variables

compute_dispro() stable

Compute disproportionality

compute_interaction() experimental

Compute interaction disproportionality

compute_or_mod() stable

Compute (r)OR from a model summary

create_ex_main_txt() create_ex_sub_txt() create_ex_who_txt() create_ex_meddra_asc() create_ex_main_pq() create_ex_sub_pq() stable

Example source tables for VigiBase and MedDRA

demo_ drug_ adr_ link_ followup_ ind_ out_ srce_

Data of immune checkpoint inhibitors.

desc_cont() stable

Summarise continuous variables

desc_dch() stable

Dechallenge descriptive

desc_facvar() stable

Summarise categorical variables

desc_outcome() experimental

Outcome descriptive

desc_rch() stable

Rechallenge descriptive

desc_tto() stable

Time to onset descriptive

dt_fst() deprecated

Read fst and convert to data.table

dt_parquet() stable

Read parquet and convert to data.table

ex_

Data for the immune checkpoint inhibitors example

extract_tto() stable

Time to onset extraction

get_atc_code() stable

Get ATC codes (DrecNos or MPIs)

get_drecno() stable

Get DrecNo from drug names or MedicinalProd_Id

get_llt_smq() stable

Get low level term codes from SMQs

get_llt_soc() stable

Get low level term codes from soc classification

ic_tail() stable

Credibility interval limits for the information component

meddra_ smq_list_content_ smq_list_ smq_content_

Sample of MedDRA

mp_ thg_

Sample of WHODrug

nice_p() stable

Nice printing of p-values

screen_adr experimental

Screening of adverse drug reactions

screen_drug() experimental

Screening of drugs

tb_meddra() stable

Create MedDRA tables

tb_subset() stable

Extract of subset of Vigibase

tb_vigibase() stable

Create VigiBase ECL tables

tb_who() stable

Create WHO tables

vigi_routine() experimental

Display routine pharmacovigilance summary